Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA4P43681 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA4P43681 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA4P43681 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA4P43681 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA4P43681 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA4P43681 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA4P43681 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA4P43681 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA4P43681 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA4P43681 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA4P43681 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA4P43681 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AC004967.1-201ENST00000453589 447 ntBASIC16.3■□□□□ 0.2
CHRNA4P43681 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 RARRES2P9-201ENST00000565168 469 ntBASIC16.3■□□□□ 0.2
CHRNA4P43681 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AC024267.1-201ENST00000582320 895 ntBASIC16.3■□□□□ 0.2
CHRNA4P43681 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AC027612.4-201ENST00000605371 583 ntBASIC16.3■□□□□ 0.2
CHRNA4P43681 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA4P43681 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA4P43681 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA4P43681 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA4P43681 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA4P43681 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA4P43681 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA4P43681 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA4P43681 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA4P43681 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA4P43681 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA4P43681 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHRNA4P43681 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 MIR1233-2-201ENST00000408138 82 ntBASIC16.29■□□□□ 0.2
CHRNA4P43681 MIR1233-1-201ENST00000408722 82 ntBASIC16.29■□□□□ 0.2
CHRNA4P43681 RPS8P6-201ENST00000426177 609 ntBASIC16.29■□□□□ 0.2
CHRNA4P43681 AP006288.1-201ENST00000446065 395 ntBASIC16.29■□□□□ 0.2
CHRNA4P43681 DNAJB3-202ENST00000449667 1266 ntBASIC16.29■□□□□ 0.2
CHRNA4P43681 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA4P43681 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHRNA4P43681 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA4P43681 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHRNA4P43681 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA4P43681 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA4P43681 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA4P43681 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA4P43681 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA4P43681 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA4P43681 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA4P43681 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA4P43681 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHRNA4P43681 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA4P43681 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA4P43681 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CHRNA4P43681 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 AL136982.4-201ENST00000437689 1740 ntBASIC16.28■□□□□ 0.2
CHRNA4P43681 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA4P43681 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA4P43681 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms