Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 AC034105.1-201ENST00000563488 319 ntBASIC12.38□□□□□ -0.43
HLA-DMBP28068 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DMBP28068 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DMBP28068 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 KRT18P13-201ENST00000400056 1290 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 IGLL3P-201ENST00000412472 434 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 AL591424.1-201ENST00000442569 1213 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 AC092865.5-201ENST00000545435 363 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 AC140113.2-201ENST00000604370 208 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 GPALPP1-207ENST00000611650 899 ntBASIC12.37□□□□□ -0.43
HLA-DMBP28068 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DMBP28068 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DMBP28068 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DMBP28068 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DMBP28068 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms