Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.22■□□□□ 0.35
TIMP1P01033 MTX1P1-201ENST00000440904 838 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 HOMER2P2-201ENST00000451621 847 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.22■□□□□ 0.35
TIMP1P01033 AP001582.1-201ENST00000525856 295 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 AC105129.2-201ENST00000559536 390 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.22■□□□□ 0.35
TIMP1P01033 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TIMP1P01033 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.22■□□□□ 0.35
TIMP1P01033 MIR6727-201ENST00000620702 65 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TIMP1P01033 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TIMP1P01033 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 UPF3AP2-201ENST00000457924 1132 ntBASIC17.21■□□□□ 0.35
TIMP1P01033 RPSAP36-202ENST00000494591 1261 ntBASIC17.21■□□□□ 0.35
TIMP1P01033 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.21■□□□□ 0.35
TIMP1P01033 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 AP005019.2-201ENST00000615104 511 ntBASIC17.21■□□□□ 0.35
TIMP1P01033 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMP1P01033 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIMP1P01033 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TIMP1P01033 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.21■□□□□ 0.34
TIMP1P01033 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TIMP1P01033 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP1P01033 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.2■□□□□ 0.34
TIMP1P01033 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.2■□□□□ 0.34
TIMP1P01033 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.2■□□□□ 0.34
TIMP1P01033 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TIMP1P01033 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMP1P01033 AC145423.3-201ENST00000615987 467 ntBASIC17.2■□□□□ 0.34
TIMP1P01033 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMP1P01033 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 AC015818.8-201ENST00000587907 1519 ntBASIC17.2■□□□□ 0.34
TIMP1P01033 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.2■□□□□ 0.34
TIMP1P01033 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TIMP1P01033 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMP1P01033 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMP1P01033 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TIMP1P01033 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms