Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.71□□□□□ -0.37
CUBNO60494 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.71□□□□□ -0.37
CUBNO60494 AC138951.2-201ENST00000623455 1161 ntBASIC12.71□□□□□ -0.37
CUBNO60494 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.71□□□□□ -0.37
CUBNO60494 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.71□□□□□ -0.37
CUBNO60494 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CUBNO60494 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CUBNO60494 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CUBNO60494 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.71□□□□□ -0.38
CUBNO60494 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.71□□□□□ -0.38
CUBNO60494 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.71□□□□□ -0.38
CUBNO60494 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CUBNO60494 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.38
CUBNO60494 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.71□□□□□ -0.38
CUBNO60494 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CUBNO60494 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CUBNO60494 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 AC006001.1-201ENST00000325130 474 ntBASIC12.7□□□□□ -0.38
CUBNO60494 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 AC104784.1-201ENST00000473096 294 ntBASIC12.7□□□□□ -0.38
CUBNO60494 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.7□□□□□ -0.38
CUBNO60494 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.7□□□□□ -0.38
CUBNO60494 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.7□□□□□ -0.38
CUBNO60494 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 KRT18P64-201ENST00000434946 1219 ntBASIC12.7□□□□□ -0.38
CUBNO60494 FGFR3P5-201ENST00000564496 886 ntBASIC12.7□□□□□ -0.38
CUBNO60494 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms