Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 AC142381.1-201ENST00000426099 345 ntBASIC13.87□□□□□ -0.19
GCM1Q9NP62 FAM58DP-201ENST00000428076 619 ntBASIC13.87□□□□□ -0.19
GCM1Q9NP62 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 POU5F1P6-201ENST00000466990 990 ntBASIC13.87□□□□□ -0.19
GCM1Q9NP62 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SLC25A39P2-201ENST00000537614 270 ntBASIC13.87□□□□□ -0.19
GCM1Q9NP62 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AC079328.2-201ENST00000561241 3354 ntBASIC13.86□□□□□ -0.19
GCM1Q9NP62 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AL139384.1-201ENST00000612143 3047 ntBASIC13.86□□□□□ -0.19
GCM1Q9NP62 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 FOXO1B-201ENST00000504678 1527 ntBASIC13.86□□□□□ -0.19
GCM1Q9NP62 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AC092183.1-201ENST00000469884 875 ntBASIC13.86□□□□□ -0.19
GCM1Q9NP62 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 SPTSSB-204ENST00000617024 1292 ntBASIC13.86□□□□□ -0.19
GCM1Q9NP62 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GCM1Q9NP62 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms