Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 MTHFR-217ENST00000641820 1569 ntBASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 KRT8P37-201ENST00000451609 1420 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AC002472.2-201ENST00000442739 958 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 UGT1A2P-201ENST00000454886 866 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AL512361.1-201ENST00000554200 418 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AC008761.3-201ENST00000624803 892 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDK5RAP1Q96SZ6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 AC018695.7-201ENST00000624587 2492 ntBASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms