Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 HLA-DQB2-229ENST00000411527 1059 ntBASIC22.44■■□□□ 1.18
UBR1Q8IWV7 NKAIN1P1-201ENST00000435754 582 ntBASIC22.44■■□□□ 1.18
UBR1Q8IWV7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 AC073413.1-201ENST00000603927 732 ntBASIC22.44■■□□□ 1.18
UBR1Q8IWV7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC22.44■■□□□ 1.18
UBR1Q8IWV7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC22.44■■□□□ 1.18
UBR1Q8IWV7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 CD8B2-202ENST00000417670 633 ntBASIC22.43■■□□□ 1.18
UBR1Q8IWV7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 AC105020.1-201ENST00000435356 2205 ntBASIC22.43■■□□□ 1.18
UBR1Q8IWV7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBR1Q8IWV7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 RN7SL720P-201ENST00000488178 304 ntBASIC22.42■■□□□ 1.18
UBR1Q8IWV7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UBR1Q8IWV7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 KLF2P2-201ENST00000416807 1039 ntBASIC22.41■■□□□ 1.18
UBR1Q8IWV7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UBR1Q8IWV7 AC139713.2-201ENST00000641328 2723 ntBASIC22.41■■□□□ 1.18
UBR1Q8IWV7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC22.4■■□□□ 1.18
UBR1Q8IWV7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms