Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 AP001282.1-201ENST00000531301 1499 ntBASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 AC025048.6-201ENST00000634326 1161 ntBASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC60Q8IWA6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AC012645.4-201ENST00000610691 1061 ntBASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC60Q8IWA6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 AC005225.4-201ENST00000557330 545 ntBASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 Z97205.2-201ENST00000564697 1639 ntBASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms