Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.51■□□□□ 0.39
EXTL3O43909 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.51■□□□□ 0.39
EXTL3O43909 SPDYE17-201ENST00000412399 783 ntBASIC17.51■□□□□ 0.39
EXTL3O43909 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.51■□□□□ 0.39
EXTL3O43909 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.51■□□□□ 0.39
EXTL3O43909 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 BNIP3P1-202ENST00000550043 1585 ntBASIC17.51■□□□□ 0.39
EXTL3O43909 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
EXTL3O43909 AL096865.1-201ENST00000606796 927 ntBASIC17.51■□□□□ 0.39
EXTL3O43909 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.51■□□□□ 0.39
EXTL3O43909 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EXTL3O43909 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EXTL3O43909 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
EXTL3O43909 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.51■□□□□ 0.39
EXTL3O43909 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 AC112504.1-201ENST00000623415 1841 ntBASIC17.5■□□□□ 0.39
EXTL3O43909 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
EXTL3O43909 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.5■□□□□ 0.39
EXTL3O43909 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 AL079307.3-201ENST00000556114 283 ntBASIC17.5■□□□□ 0.39
EXTL3O43909 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.5■□□□□ 0.39
EXTL3O43909 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.5■□□□□ 0.39
EXTL3O43909 AL589739.1-201ENST00000607720 493 ntBASIC17.5■□□□□ 0.39
EXTL3O43909 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
EXTL3O43909 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
EXTL3O43909 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.5■□□□□ 0.39
EXTL3O43909 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
EXTL3O43909 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.5■□□□□ 0.39
EXTL3O43909 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
EXTL3O43909 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EXTL3O43909 PCDHA1-201ENST00000378133 2726 ntBASIC17.49■□□□□ 0.39
EXTL3O43909 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.49■□□□□ 0.39
EXTL3O43909 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
EXTL3O43909 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 CETN4P-206ENST00000642099 2168 ntBASIC17.49■□□□□ 0.39
EXTL3O43909 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 COX20P2-201ENST00000452636 358 ntBASIC17.49■□□□□ 0.39
EXTL3O43909 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.49■□□□□ 0.39
EXTL3O43909 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 AC069120.2-201ENST00000524091 540 ntBASIC17.49■□□□□ 0.39
EXTL3O43909 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EXTL3O43909 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.49■□□□□ 0.39
EXTL3O43909 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EXTL3O43909 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
EXTL3O43909 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EXTL3O43909 AC011477.6-201ENST00000604980 1927 ntBASIC17.49■□□□□ 0.39
EXTL3O43909 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EXTL3O43909 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.48■□□□□ 0.39
EXTL3O43909 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms