Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.27□□□□□ -0.12
TRDV1A0A1B0GX56 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TPSP2-201ENST00000561760 610 ntBASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRDV1A0A1B0GX56 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 LINC00552-201ENST00000625151 2579 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 PTCHD3P3-201ENST00000403073 906 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 AC245100.5-201ENST00000452108 331 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 TOB2P1-201ENST00000469761 992 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 AC022616.7-201ENST00000525383 220 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 MIR5100-201ENST00000579544 119 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 AC133561.5-201ENST00000635547 218 ntBASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.26□□□□□ -0.13
TRDV1A0A1B0GX56 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 AC092127.1-201ENST00000567093 3455 ntBASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms