Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AL020989.1-201ENST00000422979 469 ntBASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AC097493.4-201ENST00000641197 219 ntBASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP4Q9BWG4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 AC005089.1-201ENST00000619486 2241 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 AK4P3-201ENST00000418260 669 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 AC092647.4-201ENST00000457211 535 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 VENTXP7-201ENST00000475503 772 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 KRT8P26-201ENST00000534154 1276 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP4Q9BWG4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms