Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 RARRES2P5-201ENST00000564013 466 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AC008494.3-201ENST00000606615 944 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC17Q96LX7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC17Q96LX7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC17Q96LX7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC17Q96LX7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 RPL13P2-201ENST00000440687 659 ntBASIC18.76■□□□□ 0.59
CCDC17Q96LX7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 PHKG1P2-201ENST00000457537 863 ntBASIC18.76■□□□□ 0.59
CCDC17Q96LX7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AC007431.3-201ENST00000623221 587 ntBASIC18.76■□□□□ 0.59
CCDC17Q96LX7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC17Q96LX7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AP006294.1-201ENST00000415407 339 ntBASIC18.75■□□□□ 0.59
CCDC17Q96LX7 TARDBPP1-201ENST00000442013 1203 ntBASIC18.75■□□□□ 0.59
CCDC17Q96LX7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AC093726.1-201ENST00000608064 963 ntBASIC18.75■□□□□ 0.59
CCDC17Q96LX7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 NKILA-202ENST00000614771 2598 ntBASIC18.75■□□□□ 0.59
CCDC17Q96LX7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC17Q96LX7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 AC134407.2-201ENST00000625089 1978 ntBASIC18.74■□□□□ 0.59
CCDC17Q96LX7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms