Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 AHCYP2-201ENST00000430630 1300 ntBASIC19.34■□□□□ 0.69
SLX4Q8IY92 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 REXO1L1P-202ENST00000608646 1974 ntBASIC19.34■□□□□ 0.69
SLX4Q8IY92 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 HOMER2P2-201ENST00000451621 847 ntBASIC19.34■□□□□ 0.69
SLX4Q8IY92 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 AC097724.1-201ENST00000609581 426 ntBASIC19.34■□□□□ 0.69
SLX4Q8IY92 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLX4Q8IY92 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.34■□□□□ 0.69
SLX4Q8IY92 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 AC004898.1-201ENST00000451057 766 ntBASIC19.33■□□□□ 0.69
SLX4Q8IY92 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.33■□□□□ 0.69
SLX4Q8IY92 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLX4Q8IY92 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SLX4Q8IY92 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLX4Q8IY92 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLX4Q8IY92 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.33■□□□□ 0.68
SLX4Q8IY92 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLX4Q8IY92 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLX4Q8IY92 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.33■□□□□ 0.68
SLX4Q8IY92 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 AP001282.1-201ENST00000531301 1499 ntBASIC19.32■□□□□ 0.68
SLX4Q8IY92 AC005077.2-201ENST00000449786 690 ntBASIC19.32■□□□□ 0.68
SLX4Q8IY92 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 AL133267.1-201ENST00000398220 340 ntBASIC19.32■□□□□ 0.68
SLX4Q8IY92 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLX4Q8IY92 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
SLX4Q8IY92 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLX4Q8IY92 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SLX4Q8IY92 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms