Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AC020907.1-201ENST00000616460 1350 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AL512652.2-201ENST00000625156 1716 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 BRWD1P1-201ENST00000401091 371 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 FO393414.2-201ENST00000405153 598 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AC099336.1-201ENST00000417053 1171 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AL355994.2-201ENST00000447882 704 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 AL139011.1-202ENST00000642063 584 ntBASIC17.45■□□□□ 0.38
HERC6Q8IVU3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC6Q8IVU3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 HIST3H2BA-201ENST00000436555 524 ntBASIC17.44■□□□□ 0.38
HERC6Q8IVU3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 RN7SL399P-201ENST00000471648 279 ntBASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HERC6Q8IVU3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms