Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 AC084346.2-201ENST00000607097 949 ntBASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 TK1-203ENST00000588734 1681 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 AHRR-211ENST00000515206 462 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPAQ5VT25 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 AC106886.4-201ENST00000623557 2502 ntBASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 NME6-203ENST00000415644 849 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 KC6-205ENST00000599934 556 ntTSL 4 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC23.96■■□□□ 1.43
CDC42BPAQ5VT25 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
CDC42BPAQ5VT25 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDC42BPAQ5VT25 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23.95■■□□□ 1.43
CDC42BPAQ5VT25 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 AC018892.3-201ENST00000623986 2499 ntBASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 AGER-203ENST00000375065 665 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 MIR648-201ENST00000385046 94 ntBASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 KSR1-207ENST00000578981 748 ntTSL 4 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPAQ5VT25 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms