Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.75■□□□□ 0.75
CCDC93Q567U6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 MIR4321-201ENST00000592276 80 ntBASIC19.75■□□□□ 0.75
CCDC93Q567U6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 GGT4P-201ENST00000623672 1708 ntBASIC19.75■□□□□ 0.75
CCDC93Q567U6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.74■□□□□ 0.75
CCDC93Q567U6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AC005229.1-201ENST00000392885 409 ntBASIC19.74■□□□□ 0.75
CCDC93Q567U6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AL365330.1-201ENST00000607459 531 ntBASIC19.74■□□□□ 0.75
CCDC93Q567U6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC93Q567U6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC93Q567U6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AC004945.1-201ENST00000416738 983 ntBASIC19.73■□□□□ 0.75
CCDC93Q567U6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AL359711.2-201ENST00000563105 872 ntBASIC19.73■□□□□ 0.75
CCDC93Q567U6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms