Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.34■□□□□ 0.05
RAE1P78406 FAM220BP-201ENST00000377689 816 ntBASIC15.34■□□□□ 0.05
RAE1P78406 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 HTR5BP-201ENST00000430851 1154 ntBASIC15.34■□□□□ 0.05
RAE1P78406 MKNK2P1-201ENST00000437526 628 ntBASIC15.34■□□□□ 0.05
RAE1P78406 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.34■□□□□ 0.05
RAE1P78406 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.34■□□□□ 0.05
RAE1P78406 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.34■□□□□ 0.05
RAE1P78406 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.34■□□□□ 0.05
RAE1P78406 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAE1P78406 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAE1P78406 AC104640.1-201ENST00000562617 2109 ntBASIC15.34■□□□□ 0.05
RAE1P78406 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAE1P78406 AC126177.1-201ENST00000547829 2218 ntBASIC15.33■□□□□ 0.05
RAE1P78406 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAE1P78406 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.33■□□□□ 0.05
RAE1P78406 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.33■□□□□ 0.05
RAE1P78406 BNIP3P1-202ENST00000550043 1585 ntBASIC15.33■□□□□ 0.05
RAE1P78406 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 ACTG1P14-201ENST00000446382 1122 ntBASIC15.33■□□□□ 0.04
RAE1P78406 TIMM8BP1-201ENST00000452384 211 ntBASIC15.33■□□□□ 0.04
RAE1P78406 AC069335.1-201ENST00000489972 472 ntBASIC15.33■□□□□ 0.04
RAE1P78406 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.33■□□□□ 0.04
RAE1P78406 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 RNA5SP410-201ENST00000516285 106 ntBASIC15.33■□□□□ 0.04
RAE1P78406 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.33■□□□□ 0.04
RAE1P78406 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.33■□□□□ 0.04
RAE1P78406 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.33■□□□□ 0.04
RAE1P78406 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 MTDHP5-201ENST00000598980 586 ntBASIC15.33■□□□□ 0.04
RAE1P78406 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 AC092850.2-201ENST00000623821 2697 ntBASIC15.33■□□□□ 0.04
RAE1P78406 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAE1P78406 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAE1P78406 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAE1P78406 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAE1P78406 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAE1P78406 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAE1P78406 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAE1P78406 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.32■□□□□ 0.04
RAE1P78406 CICP13-201ENST00000422015 2789 ntBASIC15.32■□□□□ 0.04
RAE1P78406 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAE1P78406 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAE1P78406 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms