Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 FAM58CP-201ENST00000435741 640 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 ALG1L5P-201ENST00000482043 771 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 PGAM5P1-201ENST00000518923 814 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.13■□□□□ 0.01
RNF144AP50876 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.13■□□□□ 0.01
RNF144AP50876 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 AC099522.2-201ENST00000607001 744 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 AC020765.3-201ENST00000613051 740 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RNF144AP50876 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF144AP50876 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RNF144AP50876 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RNF144AP50876 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 AC092474.2-201ENST00000424288 719 ntBASIC15.12■□□□□ 0.01
RNF144AP50876 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 AL138918.1-201ENST00000568306 659 ntBASIC15.12■□□□□ 0.01
RNF144AP50876 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF144AP50876 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF144AP50876 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF144AP50876 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF144AP50876 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF144AP50876 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 NORAD-201ENST00000565493 5339 ntBASIC15.11■□□□□ 0.01
RNF144AP50876 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF144AP50876 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms