Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Upk1aQ9D132 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Upk1aQ9D132 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.26■□□□□ 0.83
Upk1aQ9D132 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Upk1aQ9D132 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Upk1aQ9D132 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Upk1aQ9D132 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk1aQ9D132 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.25■□□□□ 0.83
Upk1aQ9D132 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.25■□□□□ 0.83
Upk1aQ9D132 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.25■□□□□ 0.83
Upk1aQ9D132 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk1aQ9D132 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk1aQ9D132 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Upk1aQ9D132 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk1aQ9D132 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.24■□□□□ 0.83
Upk1aQ9D132 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk1aQ9D132 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Upk1aQ9D132 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Upk1aQ9D132 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Upk1aQ9D132 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
Upk1aQ9D132 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Upk1aQ9D132 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upk1aQ9D132 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk1aQ9D132 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk1aQ9D132 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk1aQ9D132 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk1aQ9D132 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk1aQ9D132 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk1aQ9D132 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk1aQ9D132 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk1aQ9D132 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.17■□□□□ 0.82
Upk1aQ9D132 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upk1aQ9D132 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk1aQ9D132 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk1aQ9D132 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk1aQ9D132 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk1aQ9D132 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Upk1aQ9D132 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk1aQ9D132 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk1aQ9D132 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk1aQ9D132 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.14■□□□□ 0.81
Upk1aQ9D132 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upk1aQ9D132 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.13■□□□□ 0.81
Upk1aQ9D132 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk1aQ9D132 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Upk1aQ9D132 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Upk1aQ9D132 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.12■□□□□ 0.81
Upk1aQ9D132 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk1aQ9D132 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms