Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf8Q8VC56 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf8Q8VC56 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf8Q8VC56 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf8Q8VC56 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf8Q8VC56 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf8Q8VC56 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf8Q8VC56 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf8Q8VC56 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf8Q8VC56 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf8Q8VC56 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Rnf8Q8VC56 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf8Q8VC56 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf8Q8VC56 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rnf8Q8VC56 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf8Q8VC56 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf8Q8VC56 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf8Q8VC56 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rnf8Q8VC56 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf8Q8VC56 Gm10420-201ENSMUST00000121713 882 ntBASIC20.33■□□□□ 0.85
Rnf8Q8VC56 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf8Q8VC56 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rnf8Q8VC56 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Rnf8Q8VC56 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf8Q8VC56 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf8Q8VC56 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf8Q8VC56 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf8Q8VC56 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf8Q8VC56 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf8Q8VC56 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf8Q8VC56 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf8Q8VC56 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf8Q8VC56 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf8Q8VC56 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf8Q8VC56 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rnf8Q8VC56 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf8Q8VC56 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf8Q8VC56 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.26■□□□□ 0.83
Rnf8Q8VC56 Gm22567-201ENSMUST00000175542 342 ntBASIC20.26■□□□□ 0.83
Rnf8Q8VC56 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf8Q8VC56 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf8Q8VC56 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rnf8Q8VC56 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms