Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pabpn1lQ5XFR0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1lQ5XFR0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Pabpn1lQ5XFR0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.2■□□□□ 0.98
Pabpn1lQ5XFR0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1lQ5XFR0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Pabpn1lQ5XFR0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1lQ5XFR0 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.2■□□□□ 0.98
Pabpn1lQ5XFR0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1lQ5XFR0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1lQ5XFR0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1lQ5XFR0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Pabpn1lQ5XFR0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1lQ5XFR0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1lQ5XFR0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1lQ5XFR0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pabpn1lQ5XFR0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pabpn1lQ5XFR0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Pabpn1lQ5XFR0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pabpn1lQ5XFR0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.15■□□□□ 0.98
Pabpn1lQ5XFR0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Pabpn1lQ5XFR0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pabpn1lQ5XFR0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pabpn1lQ5XFR0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pabpn1lQ5XFR0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pabpn1lQ5XFR0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pabpn1lQ5XFR0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pabpn1lQ5XFR0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pabpn1lQ5XFR0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pabpn1lQ5XFR0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pabpn1lQ5XFR0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pabpn1lQ5XFR0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pabpn1lQ5XFR0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pabpn1lQ5XFR0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pabpn1lQ5XFR0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pabpn1lQ5XFR0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pabpn1lQ5XFR0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pabpn1lQ5XFR0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pabpn1lQ5XFR0 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.09■□□□□ 0.97
Pabpn1lQ5XFR0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pabpn1lQ5XFR0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pabpn1lQ5XFR0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pabpn1lQ5XFR0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pabpn1lQ5XFR0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pabpn1lQ5XFR0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pabpn1lQ5XFR0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pabpn1lQ5XFR0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Pabpn1lQ5XFR0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms