Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cks1brtQ3UNC9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cks1brtQ3UNC9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cks1brtQ3UNC9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Cks1brtQ3UNC9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1brtQ3UNC9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.39■□□□□ 0.05
Cks1brtQ3UNC9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1brtQ3UNC9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1brtQ3UNC9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cks1brtQ3UNC9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cks1brtQ3UNC9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1brtQ3UNC9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cks1brtQ3UNC9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1brtQ3UNC9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Cks1brtQ3UNC9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cks1brtQ3UNC9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1brtQ3UNC9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Gm30023-201ENSMUST00000197970 889 ntBASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1brtQ3UNC9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.34■□□□□ 0.05
Cks1brtQ3UNC9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cks1brtQ3UNC9 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.33■□□□□ 0.05
Cks1brtQ3UNC9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 453.6 ms