Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf17O88472 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Tnfrsf17O88472 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf17O88472 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.08■□□□□ 0.8
Tnfrsf17O88472 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf17O88472 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Gm27011-201ENSMUST00000182352 972 ntBASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf17O88472 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf17O88472 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf17O88472 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf17O88472 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf17O88472 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf17O88472 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf17O88472 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf17O88472 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf17O88472 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf17O88472 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf17O88472 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.02■□□□□ 0.8
Tnfrsf17O88472 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf17O88472 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
Tnfrsf17O88472 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf17O88472 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.01■□□□□ 0.79
Tnfrsf17O88472 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf17O88472 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf17O88472 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20■□□□□ 0.79
Tnfrsf17O88472 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf17O88472 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf17O88472 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20■□□□□ 0.79
Tnfrsf17O88472 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf17O88472 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Gm27405-201ENSMUST00000184201 112 ntBASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Tnfrsf17O88472 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Gm26571-201ENSMUST00000181399 666 ntBASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Gm8493-201ENSMUST00000196881 489 ntBASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Tnfrsf17O88472 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.97■□□□□ 0.79
Tnfrsf17O88472 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf17O88472 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Gm42569-201ENSMUST00000200539 472 ntBASIC19.95■□□□□ 0.78
Tnfrsf17O88472 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.95■□□□□ 0.78
Tnfrsf17O88472 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf17O88472 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf17O88472 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf17O88472 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf17O88472 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms