Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ercc2O08811 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ercc2O08811 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ercc2O08811 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ercc2O08811 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ercc2O08811 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ercc2O08811 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ercc2O08811 Gm13238-201ENSMUST00000117655 780 ntBASIC21.86■■□□□ 1.09
Ercc2O08811 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ercc2O08811 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ercc2O08811 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ercc2O08811 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ercc2O08811 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Ercc2O08811 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ercc2O08811 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc2O08811 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc2O08811 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.84■■□□□ 1.09
Ercc2O08811 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc2O08811 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
Ercc2O08811 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc2O08811 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc2O08811 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc2O08811 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ercc2O08811 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ercc2O08811 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ercc2O08811 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ercc2O08811 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ercc2O08811 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.83■■□□□ 1.09
Ercc2O08811 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ercc2O08811 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ercc2O08811 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ercc2O08811 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc2O08811 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.81■■□□□ 1.08
Ercc2O08811 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ercc2O08811 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ercc2O08811 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.81■■□□□ 1.08
Ercc2O08811 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ercc2O08811 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ercc2O08811 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ercc2O08811 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ercc2O08811 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ercc2O08811 Gm43566-201ENSMUST00000196851 808 ntBASIC21.8■■□□□ 1.08
Ercc2O08811 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ercc2O08811 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Ercc2O08811 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ercc2O08811 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc2O08811 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc2O08811 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc2O08811 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc2O08811 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc2O08811 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ercc2O08811 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.79■■□□□ 1.08
Ercc2O08811 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ercc2O08811 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ercc2O08811 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ercc2O08811 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ercc2O08811 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ercc2O08811 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ercc2O08811 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ercc2O08811 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ercc2O08811 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ercc2O08811 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ercc2O08811 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ercc2O08811 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ercc2O08811 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.76■■□□□ 1.07
Ercc2O08811 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc2O08811 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.75■■□□□ 1.07
Ercc2O08811 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.75■■□□□ 1.07
Ercc2O08811 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc2O08811 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.74■■□□□ 1.07
Ercc2O08811 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ercc2O08811 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms