Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv8-28A0A0G2JE47 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv8-28A0A0G2JE47 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Igkv8-28A0A0G2JE47 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Igkv8-28A0A0G2JE47 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igkv8-28A0A0G2JE47 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv8-28A0A0G2JE47 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv8-28A0A0G2JE47 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv8-28A0A0G2JE47 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igkv8-28A0A0G2JE47 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Igkv8-28A0A0G2JE47 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.27□□□□□ -0.29
Igkv8-28A0A0G2JE47 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv8-28A0A0G2JE47 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igkv8-28A0A0G2JE47 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Igkv8-28A0A0G2JE47 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Gm22567-201ENSMUST00000175542 342 ntBASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Iqck-206ENSMUST00000208658 2891 ntBASIC13.26□□□□□ -0.29
Igkv8-28A0A0G2JE47 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igkv8-28A0A0G2JE47 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Igkv8-28A0A0G2JE47 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Igkv8-28A0A0G2JE47 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms