Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.76■■□□□ 1.07
PHF8Q9UPP1 PHKG1P2-201ENST00000457537 863 ntBASIC21.76■■□□□ 1.07
PHF8Q9UPP1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHF8Q9UPP1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC105020.1-201ENST00000435356 2205 ntBASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 MIR326-201ENST00000362220 95 ntBASIC21.75■■□□□ 1.07
PHF8Q9UPP1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC136604.1-201ENST00000418535 575 ntBASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC022137.2-201ENST00000503482 481 ntBASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PHF8Q9UPP1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 HNRNPUP1-201ENST00000554987 333 ntBASIC21.74■■□□□ 1.07
PHF8Q9UPP1 NIFKP4-201ENST00000567275 1192 ntBASIC21.74■■□□□ 1.07
PHF8Q9UPP1 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.74■■□□□ 1.07
PHF8Q9UPP1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.74■■□□□ 1.07
PHF8Q9UPP1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHF8Q9UPP1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms