Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AL355864.2-201ENST00000447420 863 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 RPL13AP20-201ENST00000459725 609 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AC079328.1-201ENST00000560358 952 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AC036164.1-201ENST00000570544 333 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 RN7SL560P-201ENST00000577943 264 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AC009542.2-202ENST00000619004 1067 ntBASIC16.03■□□□□ 0.16
NCDNQ9UBB6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCDNQ9UBB6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 CALR4P-201ENST00000431943 946 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AP001258.2-201ENST00000529891 490 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 PTP4A1P2-201ENST00000546033 454 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AC079316.1-201ENST00000548397 411 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 C2orf69P2-201ENST00000562032 1123 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 AL022328.3-201ENST00000607943 679 ntBASIC16.02■□□□□ 0.16
NCDNQ9UBB6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.02■□□□□ 0.16
NCDNQ9UBB6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCDNQ9UBB6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCDNQ9UBB6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 264.5 ms