Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.45■□□□□ 0.22
HACD3Q9P035 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 AC027307.2-201ENST00000591252 911 ntBASIC16.45■□□□□ 0.22
HACD3Q9P035 AL365330.1-201ENST00000607459 531 ntBASIC16.45■□□□□ 0.22
HACD3Q9P035 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HACD3Q9P035 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HACD3Q9P035 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.45■□□□□ 0.22
HACD3Q9P035 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HACD3Q9P035 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HACD3Q9P035 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AC105917.1-201ENST00000506637 2539 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 RPSAP43-201ENST00000402237 625 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AC079140.1-201ENST00000508039 487 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AC092865.5-201ENST00000545435 363 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AC243562.1-201ENST00000560672 389 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AC010327.4-202ENST00000591484 748 ntBASIC16.44■□□□□ 0.22
HACD3Q9P035 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HACD3Q9P035 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HACD3Q9P035 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.44■□□□□ 0.22
HACD3Q9P035 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HACD3Q9P035 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.43■□□□□ 0.22
HACD3Q9P035 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HACD3Q9P035 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HACD3Q9P035 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.43■□□□□ 0.22
HACD3Q9P035 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HACD3Q9P035 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
HACD3Q9P035 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
HACD3Q9P035 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.43■□□□□ 0.22
HACD3Q9P035 TIMM8BP1-201ENST00000452384 211 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms