Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 AC078925.2-201ENST00000624013 1973 ntBASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHDC9Q8NEP7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 KRT90P-201ENST00000549264 1064 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 DUX4L45-201ENST00000566406 1057 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 GNRHR2-203ENST00000581100 1187 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 MIR3615-201ENST00000581999 87 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 AC010328.2-201ENST00000597698 1111 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 AL139099.5-201ENST00000635274 300 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 RHOXF1P1-202ENST00000635473 501 ntBASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHDC9Q8NEP7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KLHDC9Q8NEP7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.64■□□□□ 0.42
KLHDC9Q8NEP7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
KLHDC9Q8NEP7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.64■□□□□ 0.42
KLHDC9Q8NEP7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KLHDC9Q8NEP7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AL645608.8-201ENST00000606034 2086 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 MIR1247-201ENST00000408206 136 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 GPAA1P2-201ENST00000417923 928 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 RPL13AP20-201ENST00000459725 609 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AC008687.7-202ENST00000637404 953 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AC068587.10-201ENST00000641210 219 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHDC9Q8NEP7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHDC9Q8NEP7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHDC9Q8NEP7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms