Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC092552.1-201ENST00000547243 906 ntBASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 SNX29P1-201ENST00000548357 1007 ntBASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 AC022211.2-201ENST00000585075 2527 ntBASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 Z97205.2-201ENST00000564697 1639 ntBASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 AC015936.2-201ENST00000593177 259 ntBASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 COX11-210ENST00000639671 696 ntBASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS3Q8IXF0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AP005482.1-201ENST00000563722 1273 ntBASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AC010319.3-201ENST00000597028 470 ntBASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 LINC01115-203ENST00000606068 577 ntBASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AL391069.4-201ENST00000609583 481 ntBASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS3Q8IXF0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms