Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ACTG1P3-201ENST00000431775 1114 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 KRT8P22-201ENST00000562317 1415 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM71Q2Q1W2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AC093525.8-201ENST00000624099 1342 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 KRT18P64-201ENST00000434946 1219 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AL162726.2-201ENST00000438986 1017 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 FAM86LP-201ENST00000478302 853 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AL359711.2-201ENST00000563105 872 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 AC133539.2-201ENST00000604757 467 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 CU634019.7-201ENST00000624153 1185 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 FP236241.2-201ENST00000624906 1185 ntBASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms