Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH6P55285 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH6P55285 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH6P55285 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CDH6P55285 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH6P55285 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH6P55285 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.89■□□□□ 0.3
CDH6P55285 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH6P55285 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH6P55285 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH6P55285 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH6P55285 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDH6P55285 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CDH6P55285 AC073389.1-201ENST00000595595 795 ntBASIC16.89■□□□□ 0.29
CDH6P55285 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH6P55285 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH6P55285 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH6P55285 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH6P55285 PRAL-201ENST00000624952 3286 ntBASIC16.88■□□□□ 0.29
CDH6P55285 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH6P55285 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH6P55285 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 YBX2P1-201ENST00000394192 760 ntBASIC16.88■□□□□ 0.29
CDH6P55285 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH6P55285 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.88■□□□□ 0.29
CDH6P55285 HAUS4P1-201ENST00000406739 1145 ntBASIC16.88■□□□□ 0.29
CDH6P55285 FAM86C2P-203ENST00000528684 1004 ntBASIC16.88■□□□□ 0.29
CDH6P55285 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
CDH6P55285 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CDH6P55285 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH6P55285 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH6P55285 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms