Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 AL662844.4-201ENST00000606367 2838 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 AC093724.1-201ENST00000448659 1027 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.16■□□□□ 0.02
PSMD4P55036 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.16■□□□□ 0.02
PSMD4P55036 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
PSMD4P55036 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.16■□□□□ 0.02
PSMD4P55036 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PSMD4P55036 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 AL596087.1-201ENST00000400979 1969 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 REXO1L8P-201ENST00000604378 1897 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 AC073439.1-201ENST00000624121 1774 ntBASIC15.16■□□□□ 0.02
PSMD4P55036 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PSMD4P55036 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.15■□□□□ 0.02
PSMD4P55036 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.15■□□□□ 0.02
PSMD4P55036 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.15■□□□□ 0.02
PSMD4P55036 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 IGHV3-62-201ENST00000520057 340 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 AC105233.2-201ENST00000523697 349 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 AF228730.5-201ENST00000530288 346 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
PSMD4P55036 AC008267.7-201ENST00000624570 1194 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 AL592424.1-201ENST00000563624 1536 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.15■□□□□ 0.02
PSMD4P55036 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 ELL2P1-201ENST00000413990 1906 ntBASIC15.15■□□□□ 0.02
PSMD4P55036 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PSMD4P55036 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.15■□□□□ 0.02
PSMD4P55036 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.02
PSMD4P55036 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms