Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.06□□□□□ -0.16
NrlP54846 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NrlP54846 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NrlP54846 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NrlP54846 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NrlP54846 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NrlP54846 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.05□□□□□ -0.16
NrlP54846 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NrlP54846 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Gm16202-201ENSMUST00000117532 544 ntBASIC14.05□□□□□ -0.16
NrlP54846 Gm8805-201ENSMUST00000117848 313 ntBASIC14.05□□□□□ -0.16
NrlP54846 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Gm26083-201ENSMUST00000157904 193 ntBASIC14.05□□□□□ -0.16
NrlP54846 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Mir3102-201ENSMUST00000175555 104 ntBASIC14.05□□□□□ -0.16
NrlP54846 Gm6222-202ENSMUST00000182143 629 ntBASIC14.05□□□□□ -0.16
NrlP54846 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.05□□□□□ -0.16
NrlP54846 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.05□□□□□ -0.16
NrlP54846 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.05□□□□□ -0.16
NrlP54846 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.05□□□□□ -0.16
NrlP54846 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NrlP54846 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NrlP54846 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NrlP54846 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.04□□□□□ -0.16
NrlP54846 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.04□□□□□ -0.16
NrlP54846 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.04□□□□□ -0.16
NrlP54846 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.04□□□□□ -0.16
NrlP54846 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.04□□□□□ -0.16
NrlP54846 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.04□□□□□ -0.16
NrlP54846 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.04□□□□□ -0.16
NrlP54846 Gm8227-201ENSMUST00000223306 571 ntBASIC14.04□□□□□ -0.16
NrlP54846 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.04□□□□□ -0.16
NrlP54846 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NrlP54846 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NrlP54846 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.03□□□□□ -0.16
NrlP54846 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.03□□□□□ -0.16
NrlP54846 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.03□□□□□ -0.16
NrlP54846 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.03□□□□□ -0.16
NrlP54846 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NrlP54846 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Mir877-201ENSMUST00000104738 85 ntBASIC14.03□□□□□ -0.16
NrlP54846 Gm15808-201ENSMUST00000119046 604 ntBASIC14.03□□□□□ -0.16
NrlP54846 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.03□□□□□ -0.16
NrlP54846 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms