Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 AC138035.3-201ENST00000622706 2791 ntBASIC13.31□□□□□ -0.28
SSSCA1O60232 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 CHCHD2P8-201ENST00000429873 447 ntBASIC13.3□□□□□ -0.28
SSSCA1O60232 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.3□□□□□ -0.28
SSSCA1O60232 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 AC091167.2-201ENST00000579581 588 ntBASIC13.3□□□□□ -0.28
SSSCA1O60232 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 BNIP3P18-201ENST00000593976 575 ntBASIC13.3□□□□□ -0.28
SSSCA1O60232 CYP2A7P1-201ENST00000595391 815 ntBASIC13.3□□□□□ -0.28
SSSCA1O60232 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 AC133561.5-201ENST00000635547 218 ntBASIC13.3□□□□□ -0.28
SSSCA1O60232 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSSCA1O60232 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SSSCA1O60232 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSSCA1O60232 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSSCA1O60232 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 AC079776.2-201ENST00000641154 1609 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.29□□□□□ -0.28
SSSCA1O60232 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.29□□□□□ -0.28
SSSCA1O60232 BX276092.5-203ENST00000456199 560 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.29□□□□□ -0.28
SSSCA1O60232 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.29□□□□□ -0.28
SSSCA1O60232 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.29□□□□□ -0.28
SSSCA1O60232 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.29□□□□□ -0.28
SSSCA1O60232 AC020765.3-201ENST00000613051 740 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 AC073592.4-201ENST00000623827 446 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 AC233702.3-201ENST00000578656 1387 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 CICP13-201ENST00000422015 2789 ntBASIC13.29□□□□□ -0.28
SSSCA1O60232 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSSCA1O60232 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSSCA1O60232 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSSCA1O60232 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms