Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AC007967.4-201ENST00000614700 386 ntBASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 SPDYE12P-201ENST00000618416 771 ntBASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AC026691.1-201ENST00000602502 2017 ntBASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AL353779.1-201ENST00000434793 351 ntBASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AC010336.2-201ENST00000564226 506 ntBASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 RN7SL828P-201ENST00000607615 303 ntBASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MIR6805-201ENST00000615055 62 ntBASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-3Q8TAU0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AL603832.2-201ENST00000566195 2125 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 RPL37AP1-201ENST00000412502 279 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AC140912.1-201ENST00000577171 1054 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 AL162274.1-201ENST00000617191 1098 ntBASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-3Q8TAU0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms