Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 FAM58DP-201ENST00000428076 619 ntBASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 MIR4321-201ENST00000592276 80 ntBASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AP001160.2-201ENST00000596071 487 ntBASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AC027612.4-201ENST00000605371 583 ntBASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AL596087.1-201ENST00000400979 1969 ntBASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 ALG1L8P-201ENST00000533887 760 ntBASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 RARRES2P9-201ENST00000565168 469 ntBASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC148Q8NFR7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 GPS2P2-201ENST00000430745 888 ntBASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 AC061975.2-201ENST00000581722 295 ntBASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 GPALPP1-207ENST00000611650 899 ntBASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 AP3S2-216ENST00000617003 1561 ntBASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC148Q8NFR7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms