Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 GGT4P-201ENST00000623672 1708 ntBASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC020916.1-201ENST00000587762 1774 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC005229.1-201ENST00000392885 409 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 MIR1247-201ENST00000408206 136 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 GPAA1P2-201ENST00000417923 928 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 FAM21FP-201ENST00000426241 1131 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC092337.1-201ENST00000568699 1129 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 UBALD1-205ENST00000590891 2641 ntBASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.68■□□□□ 0.58
OTOP1Q7RTM1 AC011676.5-201ENST00000624864 2660 ntBASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 PFN1P12-201ENST00000455938 534 ntBASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AC243960.2-201ENST00000600996 747 ntBASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.67■□□□□ 0.58
OTOP1Q7RTM1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 FO681548.1-201ENST00000455617 1132 ntBASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 AC104596.2-201ENST00000512793 793 ntBASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 ZNF767P-206ENST00000513792 565 ntBASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 AC090340.1-201ENST00000620778 4980 ntBASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
OTOP1Q7RTM1 GPAA1P2-202ENST00000606848 1787 ntBASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms