Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC138969.3-201ENST00000546612 1459 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC138932.2-201ENST00000548268 1459 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC126755.4-201ENST00000549796 1459 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 REXO1L1P-202ENST00000608646 1974 ntBASIC19.29■□□□□ 0.68
PDS5AQ29RF7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 TOMM22P5-201ENST00000416399 439 ntBASIC19.29■□□□□ 0.68
PDS5AQ29RF7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 HTR7P1-202ENST00000624664 4411 ntBASIC19.29■□□□□ 0.68
PDS5AQ29RF7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDS5AQ29RF7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AL450472.2-201ENST00000603663 1156 ntBASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AL158212.4-201ENST00000624062 1286 ntBASIC19.28■□□□□ 0.68
PDS5AQ29RF7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDS5AQ29RF7 AP006294.1-201ENST00000415407 339 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 ELK1P1-201ENST00000485699 580 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 AC097359.3-201ENST00000603982 1210 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 TMEM261P1-201ENST00000604899 340 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms