Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SUMO3P55854 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SUMO3P55854 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.68□□□□□ -0.06
SUMO3P55854 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.68□□□□□ -0.06
SUMO3P55854 MIR6080-201ENST00000617359 66 ntBASIC14.68□□□□□ -0.06
SUMO3P55854 LINC00628-201ENST00000628516 1289 ntBASIC14.68□□□□□ -0.06
SUMO3P55854 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.68□□□□□ -0.06
SUMO3P55854 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SUMO3P55854 LINC02447-202ENST00000501888 2146 ntBASIC14.68□□□□□ -0.06
SUMO3P55854 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SUMO3P55854 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 CNN2P2-201ENST00000443536 909 ntBASIC14.67□□□□□ -0.06
SUMO3P55854 CNN2P3-201ENST00000450201 906 ntBASIC14.67□□□□□ -0.06
SUMO3P55854 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 AC069262.1-201ENST00000539058 672 ntBASIC14.67□□□□□ -0.06
SUMO3P55854 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SUMO3P55854 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 AC006538.3-201ENST00000612495 578 ntBASIC14.67□□□□□ -0.06
SUMO3P55854 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 AL136317.3-201ENST00000618497 906 ntBASIC14.67□□□□□ -0.06
SUMO3P55854 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SUMO3P55854 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SUMO3P55854 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SUMO3P55854 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.66□□□□□ -0.06
SUMO3P55854 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SUMO3P55854 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 AC022188.1-201ENST00000620960 1664 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.66□□□□□ -0.06
SUMO3P55854 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.66□□□□□ -0.06
SUMO3P55854 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.66□□□□□ -0.06
SUMO3P55854 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 AC025678.2-201ENST00000562061 970 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 AC105021.1-202ENST00000570572 669 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms