Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SMPD1P17405 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.9■□□□□ 0.46
SMPD1P17405 KRT18P64-201ENST00000434946 1219 ntBASIC17.9■□□□□ 0.46
SMPD1P17405 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.9■□□□□ 0.46
SMPD1P17405 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.9■□□□□ 0.46
SMPD1P17405 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.9■□□□□ 0.46
SMPD1P17405 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.9■□□□□ 0.46
SMPD1P17405 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMPD1P17405 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.9■□□□□ 0.46
SMPD1P17405 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 AC018665.1-201ENST00000622927 1362 ntBASIC17.9■□□□□ 0.46
SMPD1P17405 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMPD1P17405 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMPD1P17405 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SMPD1P17405 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SMPD1P17405 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
SMPD1P17405 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.89■□□□□ 0.45
SMPD1P17405 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
SMPD1P17405 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 BNIP3P42-201ENST00000454982 569 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 FAM86LP-201ENST00000478302 853 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC092658.1-201ENST00000505836 891 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 AC104989.1-201ENST00000519711 778 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.89■□□□□ 0.45
SMPD1P17405 SLC25A47P1-201ENST00000531577 414 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 AL359711.2-201ENST00000563105 872 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
SMPD1P17405 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.89■□□□□ 0.45
SMPD1P17405 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 BNIP3P29-201ENST00000598302 571 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC233724.13-201ENST00000598383 410 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC133539.2-201ENST00000604757 467 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 AC011447.5-201ENST00000616168 564 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 CU634019.7-201ENST00000624153 1185 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 FP236241.2-201ENST00000624906 1185 ntBASIC17.89■□□□□ 0.45
SMPD1P17405 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.89■□□□□ 0.45
SMPD1P17405 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.89■□□□□ 0.45
SMPD1P17405 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMPD1P17405 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 REXO1L6P-201ENST00000603433 1515 ntBASIC17.88■□□□□ 0.45
SMPD1P17405 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.88■□□□□ 0.45
SMPD1P17405 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SMPD1P17405 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 BOLA2P3-201ENST00000404566 256 ntBASIC17.88■□□□□ 0.45
SMPD1P17405 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.88■□□□□ 0.45
SMPD1P17405 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.88■□□□□ 0.45
SMPD1P17405 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.88■□□□□ 0.45
SMPD1P17405 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.88■□□□□ 0.45
SMPD1P17405 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.88■□□□□ 0.45
SMPD1P17405 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.88■□□□□ 0.45
SMPD1P17405 BRI3BPP1-201ENST00000594224 787 ntBASIC17.88■□□□□ 0.45
SMPD1P17405 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.88■□□□□ 0.45
SMPD1P17405 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMPD1P17405 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms