Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 AL390754.1-201ENST00000619088 582 ntBASIC14.58□□□□□ -0.08
ZIC3O60481 CYP4F24P-201ENST00000586049 1580 ntBASIC14.58□□□□□ -0.08
ZIC3O60481 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC3O60481 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC3O60481 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.57□□□□□ -0.08
ZIC3O60481 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ZIC3O60481 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 AC004987.2-201ENST00000395959 1148 ntBASIC14.57□□□□□ -0.08
ZIC3O60481 HAUS4P1-201ENST00000406739 1145 ntBASIC14.57□□□□□ -0.08
ZIC3O60481 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.57□□□□□ -0.08
ZIC3O60481 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ZIC3O60481 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC3O60481 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC3O60481 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC3O60481 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.56□□□□□ -0.08
ZIC3O60481 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ZIC3O60481 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 MIR648-201ENST00000385046 94 ntBASIC14.56□□□□□ -0.08
ZIC3O60481 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 AC004890.2-204ENST00000481968 304 ntBASIC14.56□□□□□ -0.08
ZIC3O60481 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 AC243562.2-201ENST00000561247 970 ntBASIC14.56□□□□□ -0.08
ZIC3O60481 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.56□□□□□ -0.08
ZIC3O60481 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.56□□□□□ -0.08
ZIC3O60481 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.56□□□□□ -0.08
ZIC3O60481 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 AL096865.1-201ENST00000606796 927 ntBASIC14.56□□□□□ -0.08
ZIC3O60481 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms