Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 ENPP7P5-201ENST00000541031 1031 ntBASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AC025279.2-201ENST00000569730 653 ntBASIC16.44■□□□□ 0.22
DENND4AQ7Z401 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 REXO1L8P-201ENST00000604378 1897 ntBASIC16.43■□□□□ 0.22
DENND4AQ7Z401 BNIP3P1-202ENST00000550043 1585 ntBASIC16.43■□□□□ 0.22
DENND4AQ7Z401 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 AC093433.1-201ENST00000458048 571 ntBASIC16.43■□□□□ 0.22
DENND4AQ7Z401 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND4AQ7Z401 AL121723.1-201ENST00000445194 1519 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 MTX1P1-201ENST00000440904 838 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC134312.5-201ENST00000568031 1313 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 MIR326-201ENST00000362220 95 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AL118558.3-201ENST00000607414 1079 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 LINC01144-201ENST00000626198 1710 ntBASIC16.42■□□□□ 0.22
DENND4AQ7Z401 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND4AQ7Z401 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms