Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.71□□□□□ -0.7
VPS13DQ5THJ4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13DQ5THJ4 AC092171.3-201ENST00000610122 2651 ntBASIC10.71□□□□□ -0.7
VPS13DQ5THJ4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13DQ5THJ4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13DQ5THJ4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC134915.1-201ENST00000426461 574 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 CHMP4BP1-201ENST00000556017 588 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 COG4-212ENST00000564653 590 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC107373.2-201ENST00000607735 490 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC097724.1-201ENST00000609581 426 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 C1QBPP1-201ENST00000400117 770 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC004898.1-201ENST00000451057 766 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 AC106760.1-201ENST00000508690 800 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 MIR4706-201ENST00000582134 82 ntBASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13DQ5THJ4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AL096828.3-201ENST00000615354 462 ntBASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 LINC01144-201ENST00000626198 1710 ntBASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AC091804.1-201ENST00000486888 567 ntBASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 SLED1-202ENST00000512051 380 ntBASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.69□□□□□ -0.7
VPS13DQ5THJ4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms