Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-1P43699 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NKX2-1P43699 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 AL353135.1-201ENST00000606729 504 ntBASIC13.39□□□□□ -0.27
NKX2-1P43699 AC020765.3-201ENST00000613051 740 ntBASIC13.39□□□□□ -0.27
NKX2-1P43699 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 AC092919.2-201ENST00000623631 1645 ntBASIC13.39□□□□□ -0.27
NKX2-1P43699 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
NKX2-1P43699 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.38□□□□□ -0.27
NKX2-1P43699 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NKX2-1P43699 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 MINOS1P3-201ENST00000457048 203 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 AC096582.2-201ENST00000510860 516 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 AC091167.2-201ENST00000579581 588 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 AP005901.3-202ENST00000581653 237 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 AC010331.1-201ENST00000611423 582 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 PGM5P2-202ENST00000637225 1043 ntBASIC13.38□□□□□ -0.27
NKX2-1P43699 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
NKX2-1P43699 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-1P43699 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-1P43699 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-1P43699 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 AL109954.1-202ENST00000564051 2148 ntBASIC13.37□□□□□ -0.27
NKX2-1P43699 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms