Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A1P02462 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A1P02462 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.55■□□□□ 0.72
COL4A1P02462 MIR6799-201ENST00000620297 69 ntBASIC19.55■□□□□ 0.72
COL4A1P02462 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.55■□□□□ 0.72
COL4A1P02462 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
COL4A1P02462 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.55■□□□□ 0.72
COL4A1P02462 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL4A1P02462 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 AL121723.1-201ENST00000445194 1519 ntBASIC19.54■□□□□ 0.72
COL4A1P02462 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A1P02462 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL4A1P02462 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL4A1P02462 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL4A1P02462 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL4A1P02462 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL4A1P02462 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.54■□□□□ 0.72
COL4A1P02462 KRT8P22-201ENST00000562317 1415 ntBASIC19.54■□□□□ 0.72
COL4A1P02462 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.54■□□□□ 0.72
COL4A1P02462 MIR4525-201ENST00000580000 75 ntBASIC19.54■□□□□ 0.72
COL4A1P02462 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.54■□□□□ 0.72
COL4A1P02462 AC133552.6-201ENST00000613406 534 ntBASIC19.54■□□□□ 0.72
COL4A1P02462 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.54■□□□□ 0.72
COL4A1P02462 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
COL4A1P02462 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.54■□□□□ 0.72
COL4A1P02462 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL4A1P02462 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL4A1P02462 AP001282.1-201ENST00000531301 1499 ntBASIC19.54■□□□□ 0.72
COL4A1P02462 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.53■□□□□ 0.72
COL4A1P02462 MIR1908-201ENST00000410394 80 ntBASIC19.53■□□□□ 0.72
COL4A1P02462 AC104596.2-201ENST00000512793 793 ntBASIC19.53■□□□□ 0.72
COL4A1P02462 SLC25A47P1-201ENST00000531577 414 ntBASIC19.53■□□□□ 0.72
COL4A1P02462 TDH-203ENST00000531764 1110 ntBASIC19.53■□□□□ 0.72
COL4A1P02462 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.53■□□□□ 0.72
COL4A1P02462 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.53■□□□□ 0.72
COL4A1P02462 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A1P02462 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL4A1P02462 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A1P02462 AC000095.1-201ENST00000603208 874 ntBASIC19.53■□□□□ 0.72
COL4A1P02462 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.53■□□□□ 0.72
COL4A1P02462 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.53■□□□□ 0.72
COL4A1P02462 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL4A1P02462 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL4A1P02462 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COL4A1P02462 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL4A1P02462 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.52■□□□□ 0.72
COL4A1P02462 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.52■□□□□ 0.72
COL4A1P02462 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.52■□□□□ 0.72
COL4A1P02462 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 PHKG1P2-201ENST00000457537 863 ntBASIC19.52■□□□□ 0.72
COL4A1P02462 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.52■□□□□ 0.72
COL4A1P02462 ZNF767P-206ENST00000513792 565 ntBASIC19.52■□□□□ 0.72
COL4A1P02462 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A1P02462 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.52■□□□□ 0.72
COL4A1P02462 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A1P02462 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A1P02462 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.52■□□□□ 0.72
COL4A1P02462 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 AC006449.6-201ENST00000612330 2296 ntBASIC19.52■□□□□ 0.72
COL4A1P02462 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.52■□□□□ 0.72
COL4A1P02462 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL4A1P02462 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A1P02462 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
COL4A1P02462 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A1P02462 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A1P02462 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A1P02462 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A1P02462 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms