Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 REXO1L8P-201ENST00000604378 1897 ntBASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC105020.1-201ENST00000435356 2205 ntBASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC005915.1-201ENST00000624912 2018 ntBASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP4Q9C0A0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 CNN2P8-201ENST00000421872 913 ntBASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 AC006033.1-201ENST00000440505 426 ntBASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 PHKG1P2-201ENST00000457537 863 ntBASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP4Q9C0A0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 AP001282.1-201ENST00000531301 1499 ntBASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 AC026410.3-201ENST00000514280 936 ntBASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP4Q9C0A0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms