Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chmp1b1Q99LU0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chmp1b1Q99LU0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chmp1b1Q99LU0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.58□□□□□ -0.39
Chmp1b1Q99LU0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm44855-201ENSMUST00000205725 362 ntBASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.58□□□□□ -0.4
Chmp1b1Q99LU0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Chmp1b1Q99LU0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gm15240-201ENSMUST00000118156 720 ntBASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms