Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 TNRC18P3-201ENST00000441896 2691 ntBASIC22.63■■□□□ 1.21
TMC1Q8TDI8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
TMC1Q8TDI8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AC005052.1-201ENST00000625181 2492 ntBASIC22.62■■□□□ 1.21
TMC1Q8TDI8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MRPS18AP1-201ENST00000414458 589 ntBASIC22.62■■□□□ 1.21
TMC1Q8TDI8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AL589739.1-201ENST00000607720 493 ntBASIC22.62■■□□□ 1.21
TMC1Q8TDI8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AC006449.5-201ENST00000610658 2098 ntBASIC22.62■■□□□ 1.21
TMC1Q8TDI8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 AL035456.1-201ENST00000456064 1369 ntBASIC22.62■■□□□ 1.21
TMC1Q8TDI8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMC1Q8TDI8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 HLA-V-204ENST00000476601 1289 ntBASIC22.61■■□□□ 1.21
TMC1Q8TDI8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 TERF1P3-201ENST00000505638 1227 ntBASIC22.61■■□□□ 1.21
TMC1Q8TDI8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 AC008761.3-201ENST00000624803 892 ntBASIC22.61■■□□□ 1.21
TMC1Q8TDI8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TMC1Q8TDI8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 PCGF3-213ENST00000620529 1899 ntBASIC22.6■■□□□ 1.21
TMC1Q8TDI8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMC1Q8TDI8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms