Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 ZBTB12BP-201ENST00000314232 1122 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC018695.7-201ENST00000624587 2492 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC106886.4-201ENST00000623557 2502 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC138028.6-201ENST00000616106 1482 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC092364.2-201ENST00000596710 2692 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 BOLA2P3-201ENST00000404566 256 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC026740.1-201ENST00000607068 791 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 AC008687.7-202ENST00000637404 953 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 MSTO2P-201ENST00000314835 1709 ntBASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13BQ7Z7G8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AL442647.2-201ENST00000429864 857 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AGGF1P2-201ENST00000426656 2106 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 FLJ38576-201ENST00000623820 2459 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 SOCS2P1-201ENST00000417727 557 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC091804.1-201ENST00000486888 567 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 TDH-203ENST00000531764 1110 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC133539.2-201ENST00000604757 467 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC026979.3-201ENST00000607315 403 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 PCDH8P1-201ENST00000428983 2773 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms